FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005001992

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005001992
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1473513
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCGTAC8650.0096182127.4832751
CGAAAAT17301.9113631E-67.06753731
GGGGGGG2150.0089358076.6744915-19
CCCATTT15650.0086338225.51483061
CAAGATT17300.004364625.40458731
CCCTTTT17650.00552378135.29741431
CTGATAT17950.0067299415.20887761
Produced by FastQC (version 0.11.5)