FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005002322

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005002322
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences411499331
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG1594950.016.9920799
GAGCGTC1866200.014.5532698
ATCGGAA2130600.014.4243291
TCGGAAG2266950.013.4314132
AGAGCGT2210800.012.4645667
CGGAAGA2516200.012.1174923
AAGAGCG2709050.011.1860326
AGCGGCG503550.08.7230469
CGAGTAA485350.07.3452081
GAAGAGC5299150.06.19040735
GAGCGGC771450.06.00382668
CGCCGTA903900.05.644500755-59
TCGCCGT974900.05.07420355-59
ATCGGGA500250.05.0252341
Produced by FastQC (version 0.11.5)