FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005002326

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005002326
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences436563285
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG1699900.013.6950469
GAGCGTC2003250.011.7446268
ATCGGAA2256300.010.9014911
TCGGAAG2396900.010.2683752
AGAGCGT2367900.010.0212817
TCCGATC351400.09.6959143
CGGAAGA2683650.09.1410723
AAGAGCG2930300.08.3427346
CCGATCT473400.07.08976944
TTCCGAT565200.06.5434652
CTTCCGA694250.05.3526811
Produced by FastQC (version 0.11.5)