FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005002327

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005002327
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences359202015
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA1125550.025.8198381
TCGGAAG1232050.023.5952722
CGGAAGA1393950.020.8860233
TATGCCG744850.09.19024745-49
AGAGCAC3487250.08.8463147
AGCACAC3763300.08.3340139
GAGCACA3864650.08.1379668
CGTATGC844600.08.12888445-49
GAAGAGC3874250.08.1030395
CTCGTAT738100.08.02488640-44
TCTCGTA776300.07.719653640-44
ATGCCGT957750.07.28207145-49
GCCGTCT967300.07.084261450-54
TACTCGA996450.06.95850735-39
TGCCGTC930650.06.549955445-49
ATCTCGT946250.06.44656940-44
TTACTCG937100.06.41358230-34
TCCGATC248750.06.09160044
CGTCTTC1163950.06.090426450-54
GATCGGA764450.06.0305561
Produced by FastQC (version 0.11.5)