FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005002328

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005002328
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences359202015
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG1679550.017.0973119
GAGCGTC1970400.014.6582318
ATCGGAA2178550.013.5783281
AGAGCGT2238600.012.9766067
TCGGAAG2291650.012.8575642
CGGAAGA2457950.012.004683
AAGAGCG2614200.011.2591766
TCCGATC268550.07.96586233
CGCCGTA960900.06.694930655-59
GAAGAGC4926400.06.4015945
TCGCCGT1021100.06.31442355-59
GTCGCCG1125600.05.952326355-59
CCGATCT367550.05.91752154
GCCGTAT1174500.05.67117255-59
TGGTCGC1268700.05.399788450-54
TTCCGAT453050.05.2343382
CGTATCA1322950.05.13231560-64
Produced by FastQC (version 0.11.5)