FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005002330

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005002330
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences345596943
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG1522550.08.90619
GAGCGTC1752500.07.83678678
ATCGGAA2028900.06.93374631
AGAGCGT2093900.06.69402937
TCGGAAG2137600.06.5845532
CGGAAGA2319700.06.08011773
AAGAGCG2519500.05.65818366
Produced by FastQC (version 0.11.5)