FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005002335

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005002335
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences456918221
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA1520900.060.0321921
TCGGAAG1665000.054.6872632
CGGAAGA1906450.047.7039573
AGAGCAC4571250.020.2026887
AGCACAC4976850.018.6260859
GAAGAGC5078550.018.3916025
GAGCACA5057200.018.32598
TATGCCG1176350.016.43085945-49
CGTATGC1301350.014.75122145-49
CTCGTAT1136700.014.61468140-44
TCTCGTA1167250.014.12038740-44
ATGCCGT1430450.013.47463745-49
GCCGTCT1471850.012.88119450-54
TGCCGTC1432050.012.58785845-49
AAGAGCA7636150.012.461396
ATCTCGT1388300.012.01098640-44
TCGTATG1308100.011.91832140-44
CGTCTGA1654450.011.84615315-19
ACTCCGG1614200.011.84120930-34
ACACGTC1666450.011.77271510-14
Produced by FastQC (version 0.11.5)