FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005002341

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005002341
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences491255600
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA1253850.017.639651
TCGGAAG1414900.015.4695352
CGGAAGA1666650.013.25495153
TCCGATC348650.08.0242643
TATGCCG832500.07.490919645-49
TCTCGTA879600.06.469009440-44
CGTATGC992250.06.38721145-49
GATCGGA888850.06.15427971
CTCGTAT841700.06.067727640-44
CCGATCT492800.05.75033574
GCCGTCT1138300.05.655982550-54
AGAGCAC4585950.05.3847637
ATGCCGT1112050.05.267450345-49
ATCTCGT1132300.05.259654540-44
TTCCGAT583450.05.2189792
AGCACAC4988850.05.02693849
Produced by FastQC (version 0.11.5)