FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005002342

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005002342
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences491255600
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG2025400.010.1206669
TCCGATC395350.09.5563673
GAGCGTC2385600.08.68487558
ATCGGAA2586650.08.2615511
TCGGAAG2774150.07.67682742
AGAGCGT2763000.07.6236577
CCGATCT542950.06.91835264
CGGAAGA3096750.06.8541473
TTCCGAT635850.06.34272432
AAGAGCG3395050.06.28567276
TCTCCGG852000.06.03532171
CTTCCGA807300.05.29412651
TTTCCGG857750.05.2076591
Produced by FastQC (version 0.11.5)