FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005002344

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005002344
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences434554707
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG2181250.015.5844749
GAGCGTC2548000.013.4892788
ATCGGAA2782850.012.5895181
TCCGATC336750.012.5329233
AGAGCGT2863700.012.0883267
TCGGAAG2934150.011.945282
CGGAAGA3153450.011.136933
AAGAGCG3380200.010.4063746
CCGATCT461900.09.0408954
TTCCGAT563300.07.76317642
CTTCCGA699750.06.4773741
CGCCGTA1231300.06.245630355-59
GAAGAGC6160500.06.1442335
TCGCCGT1319000.05.871031855-59
GTCGCCG1462750.05.4962755-59
GCCGTAT1459000.05.423939755-59
Produced by FastQC (version 0.11.5)