FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005002357

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005002357
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences498033612
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA1363850.020.7462371
TCGGAAG1516900.018.5732632
CGGAAGA1798900.015.7293463
TCCGATC354450.07.42265943
TATGCCG887500.07.30448145-49
CTCGTAT902000.06.546284740-44
AGAGCAC4723850.06.52526477
CGTATGC1044500.06.2495845-49
TCTCGTA951400.06.236861740-44
AGCACAC5145750.06.0494839
GAAGAGC5274900.05.9703485
TATCTCG1006850.05.903462440-44
GAGCACA5289600.05.89173758
ATGCCGT1177700.05.71760645-49
CGCTCAT1161550.05.6714230-34
GCCGTCT1207700.05.477392750-54
CCGATCT496250.05.34524544
ACCGCTC1253850.05.243524630-34
TGCCGTC1174100.05.15458345-49
ATCTCGT1199900.05.084182740-44
Produced by FastQC (version 0.11.5)