FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005002359

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005002359
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences412666838
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA1443450.022.7032361
TCGGAAG1568850.020.863942
CGGAAGA1806600.018.1142253
AGAGCAC4163800.08.4101357
TATGCCG932200.08.06495145-49
TCCGATC293450.07.9567953
AGCACAC4495500.07.8749039
GAAGAGC4597000.07.6428675
GAGCACA4619100.07.6233758
CGTATGC1059950.07.146277445-49
CTCGTAT921400.07.04060340-44
TCTCGTA959200.06.805474340-44
ATGCCGT1154450.06.602751745-49
TATCTCG998150.06.532646740-44
CGCTCAT1175700.06.421746330-34
GCCGTCT1186900.06.24997850-54
ACCGCTC1260750.06.000037730-34
TGCCGTC1143450.05.9219145-49
ATCTCGT1158800.05.84972240-44
CCGATCT416750.05.7583774
Produced by FastQC (version 0.11.5)