FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005002360

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005002360
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences412666838
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG2280900.013.9818579
TCCGATC322750.012.3800223
GAGCGTC2618850.012.266178
ATCGGAA2883250.011.5097171
TCGGAAG3013450.011.0220512
AGAGCGT2955450.011.0016767
CGGAAGA3256400.010.2392293
AAGAGCG3467800.09.54140956
CCGATCT449850.08.5578324
TTCCGAT530900.07.95007322
CTTCCGA659800.06.57279061
GAAGAGC6033250.05.89290245
CGCCGTA1270950.05.658345755-59
TCGCCGT1360650.05.303437755-59
Produced by FastQC (version 0.11.5)