FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005002362

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005002362
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences448167363
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCCGATC343100.011.238123
CCGATCT477200.08.1709294
AGCGTCG1882700.07.6797789
TTCCGAT570400.07.33163452
GAGCGTC2187250.06.7430218
ATCGGAA2529600.06.08850961
CTTCCGA700850.05.98766371
TCGGAAG2674650.05.742072
AGAGCGT2628000.05.6921057
CGGAAGA2926700.05.25001343
Produced by FastQC (version 0.11.5)