FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005002373

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005002373
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences466548635
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA1301050.037.1545831
TCGGAAG1448700.033.3539732
CGGAAGA1691000.028.5884653
TATGCCG939600.012.0961445-49
AGAGCAC4448100.011.4195357
AGCACAC4839250.010.6044549
GATCGGA759700.010.588851
CTCGTAT932900.010.47795240-44
CGTATGC1080750.010.42106345-49
GAGCACA4930250.010.38948258
GAAGAGC4959450.010.2982295
TCTCGTA974150.010.10720640-44
ATGCCGT1208850.09.545945-49
GTCACGA1227750.09.39580625-29
GCCGTCT1225900.09.21741650-54
ACGAGAT1383400.08.45628930-34
TGCCGTC1183350.08.4206745-49
ATCTCGT1197550.08.31860140-44
CGTCTGA1450700.07.96993115-19
ACACGTC1466300.07.951374510-14
Produced by FastQC (version 0.11.5)