FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005002374

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005002374
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences466548635
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG1898150.024.389929
GAGCGTC2238300.020.8382998
ATCGGAA2413350.019.7186151
TCGGAAG2589400.018.386882
AGAGCGT2590150.018.112257
CGGAAGA2889400.016.5790653
AAGAGCG3148450.015.1840926
CGCCGTA1164800.09.11384555-59
TCGCCGT1234300.08.50903555-59
GAAGAGC6215050.08.2227795
TCCGATC337750.08.0083423
GCCGTAT1373800.07.88987755-59
GTCGCCG1396650.07.758717555-59
TGGTCGC1545550.07.177934650-54
CGTATCA1556500.06.98646360-64
GTGGTCG1666750.06.683816450-54
CCGTATC1482450.06.342281355-59
GCGTCGT1771350.06.160326510-14
CGTCGTG1800650.06.09148510-14
GGTCGCC1603750.06.019770650-54
Produced by FastQC (version 0.11.5)