FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005002375

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005002375
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences381528502
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA1235850.022.0580831
TCGGAAG1340350.020.17382
GATCGGA874300.017.6782281
CGGAAGA1536650.017.6769163
TATGCCG841500.011.08808845-49
CGTATGC961150.09.71682545-49
TCTCGTA873200.09.52151840-44
CTCGTAT839650.09.12314440-44
GCCGTCT1086800.08.58941550-54
ATGCCGT1055050.08.33115445-49
ATCTCGT1048600.08.02702540-44
GTCACGA1099950.07.96998425-29
AGAGCAC3716400.07.89310937
ACGAGAT1210600.07.88590330-34
CGTCTTC1313200.07.408902650-54
CGTCTGA1297250.07.315577515-19
AGTCACG1318900.07.304323725-29
AGCACAC4055200.07.3014589
ACACGTC1309850.07.26518810-14
GAGCACA4125550.07.2068278
Produced by FastQC (version 0.11.5)