FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005002376

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005002376
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences381528502
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG1712950.015.6297039
GAGCGTC2033400.013.2699828
ATCGGAA2211650.012.4569211
AGAGCGT2307450.011.8133727
TCGGAAG2342500.011.7641832
CGGAAGA2527350.010.8888063
AAGAGCG2735450.010.1160896
CGCCGTA1038600.08.77668155-59
TCGCCGT1097900.08.31716155-59
GATCGGA1885500.08.2500881
GTCGCCG1218100.07.59642155-59
GCCGTAT1240400.06.977100455-59
CGTATCA1403100.06.730160760-64
TGGTCGC1377100.06.330816750-54
GTGGTCG1516900.06.287398350-54
GAAGAGC5168100.05.80621535
TCTTCGC1697550.05.505625230-34
GTCTTCG1730100.05.393661530-34
TCTCGGT1852500.05.377709445-49
GCGTCGT1715550.05.3456510-14
Produced by FastQC (version 0.11.5)