FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005002377

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005002377
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences319992892
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA762950.029.6700061
ATCGGAA1044800.021.8383482
TCGGAAG1139000.019.9995783
CGGAAGA1309250.017.5207334
TATGCCG734000.011.72831245-49
CTCGTAT722500.010.71887640-44
CGTATGC834500.010.30369145-49
TCTCGTA751850.010.29658640-44
ATGCCGT913700.09.59306145-49
GCCGTCT931050.09.29749550-54
GTCACGA955500.09.24320125-29
ATCTCGT902050.08.74606340-44
ACGAGAT1037350.08.53764730-34
CGTCTTC1127400.07.926450350-54
AGAGCAC3159850.07.83097178
CGTCTGA1140850.07.78474215-19
AGTCACG1158400.07.77816625-29
ACACGTC1164600.07.659878310-14
CCGTCTT1174100.07.60129550-54
CATCTCG1061650.07.58012140-44
Produced by FastQC (version 0.11.5)