FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005002404

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005002404
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences377298273
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG2266200.015.147579
GAGCGTC2540350.013.635568
ATCGGAA2860200.012.5843121
TCGGAAG2978950.012.01112652
AGAGCGT2920400.011.952917
CGGAAGA3192000.011.2497313
AAGAGCG3415650.010.4426366
TCCGATC268500.06.8071983
GAAGAGC5839600.06.51757535
CGCCGTA1361700.05.32089755-59
TCGCCGT1419750.05.107423355-59
Produced by FastQC (version 0.11.5)