FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005002414

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005002414
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences457768428
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG1956850.035.744239
GAGCGTC2267400.030.9410958
ATCGGAA2523550.029.8853321
TCGGAAG2679750.028.1233732
AGAGCGT2612250.027.021787
CGGAAGA2937200.025.7081553
AAGAGCG3170400.023.8213446
AGCGGCG629500.018.9526639
ACGAATT908550.018.0705911
CGAATTC841450.016.7705652
ATCGGGA596100.013.7342221
GAGCGGC914000.013.3228278
GAAGAGC6148000.012.7497965
CGCCGTA1268450.011.68349155-59
GAATTCG815000.010.8984653
TCGCCGT1331250.010.77273755-59
AGAGCGG1215550.010.1723337
GTCGCCG1576550.010.15474555-59
GCCGTAT1473850.010.10445855-59
TGGTCGC1686600.09.20228350-54
Produced by FastQC (version 0.11.5)