FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005002426

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005002426
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences387349947
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG2162750.012.0146659
GAGCGTC2456950.010.6438578
ATCGGAA2744300.010.0550071
TCGGAAG2877550.09.4625932
AGAGCGT2839200.09.3257237
CGGAAGA3064600.08.8727373
AAGAGCG3323250.08.1484146
TCCGATC280400.05.79413
GAAGAGC5847100.05.0452175
Produced by FastQC (version 0.11.5)