FastQCFastQC Report
Thu 1 Sep 2022
EGAF00005002508

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005002508
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4365
Sequences flagged as poor quality0
Sequence length251
%GC51

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCAGGAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA74317.02176403207331No Hit
TGCAGGAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA67515.463917525773196No Hit
AGCAGGAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA49211.271477663230241No Hit
GTCAGGAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA3417.812142038946162No Hit
TTCAGGAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA3227.376861397479955No Hit
CGCAGGAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA2696.162657502863689No Hit
GCCAGGAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA2144.902634593356243No Hit
CCCAGGAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA2024.627720504009164No Hit
CTCAGGAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA1894.329896907216495No Hit
GACAGGAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA1623.711340206185567No Hit
TCCAGGAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA1513.459335624284078No Hit
CACAGGAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA1222.7949599083619705No Hit
TACAGGAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA1022.336769759450172No Hit
ATCAGGAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA781.7869415807560136No Hit
ACCAGGAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA661.5120274914089347No Hit
AACAGGAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA551.2600229095074456No Hit
GGCAGGAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGACAGGGTCA50.11454753722794961No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)