FastQCFastQC Report
Sun 4 Sep 2022
EGAF00005002521

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005002521
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1002317
Sequences flagged as poor quality0
Sequence length251
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TACATTCGAGGAATCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG30110.3004039640153764No Hit
TTCATTCGAGGAATCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG29200.2913249999750578No Hit
TTCATTCGATGTTGCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG28160.28094904107183655No Hit
TTATTGGGAAGGAGCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG26400.2633897260048468No Hit
TCATTGGGAAGGAGCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG26320.26259157531998356No Hit
TTCATTCGACGAGGCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG25300.25241515408797816No Hit
AACATTCGAGGAATCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG24790.24732694347197542No Hit
TTATTGGGATAAGCCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG23670.23615283388389105No Hit
TTCATTCGAAGGAGCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG23170.23116439210349618No Hit
ATCATTCGAGGAATCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG23080.23026647258302513No Hit
TTCATTCGATGCACCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG22990.22936855306255408No Hit
TTATTGGGACTCAGCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG21210.21160970032434848No Hit
TTATTGGGATGTTGCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG19960.1991385958733614No Hit
CTCATTCGAAGGAGCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG19640.19594599313390873No Hit
TTCATTCGATAAGCCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG19180.1913566266959455No Hit
TGCATTCGAAGGAGCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG18870.1882637927921007No Hit
CTCATTCGATGCACCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG18760.18716633560041385No Hit
ATCATTCGATGTTGCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG18730.18686702909359015No Hit
CACATTCGAGGAATCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG17740.1769899143684084No Hit
TAATTGGGAAGGAGCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG17610.17569291950550572No Hit
TACATTCGATGTTGCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG17440.1739968493001715No Hit
CTCATTCGAGGAATCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG17330.17289939210848465No Hit
GTCATTCGAAGGAGCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG17250.17210124142362146No Hit
CGCATTCGAAGGAGCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG17090.17050494005389513No Hit
GGCATTCGACAACTCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG16980.16940748286220828No Hit
GTCATTCGATGTTGCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG16880.1684097945061293No Hit
TACATTCGATAAGCCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG16860.1682102568349135No Hit
TACATTCGACTCAGCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG16700.16661395546518715No Hit
TGATTGGGACTCAGCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG16530.1649178852598529No Hit
TTATTGGGAGGAATCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG16260.16222412669843972No Hit
ATCATTCGATGCACCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG16240.16202458902722391No Hit
TGCATTCGATAAGCCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG16220.16182505135600814No Hit
CTATTGGGAAGGAGCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG16200.16162551368479233No Hit
ATCATTCGATAAGCCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG16140.16102690067114497No Hit
CTCATTCGATGTTGCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG16130.16092713183553706No Hit
GTCATTCGATGCACCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG16100.16062782532871336No Hit
TGCATTCGACTCAGCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG16000.1596301369726344No Hit
TCATTGGGATGCACCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG15660.15623799656196594No Hit
GTCATTCGACTCAGCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG15590.15553961471271063No Hit
TACATTCGAAGGAGCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG15570.15534007704149486No Hit
TTCATTCGACTCAGCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG15560.15524030820588697No Hit
TTCATTCGATGCACCCAGGGTTTTCCCAGTCACGACGGACAAGTTTCTCA15420.15384354450737642No Hit
TGCATTCGATGTTGCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG15350.15314516265812111No Hit
GTCATTCGACAACTCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG15320.15284585615129745No Hit
GGCATTCGACTCAGCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG15250.15214747430204217No Hit
CCATTGGGATGCACCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG15200.1516486301240027No Hit
TCCATTCGAAGGAGCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG15190.1515488612883948No Hit
TCCATTCGATGCACCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG15180.15144909245278687No Hit
GCCATTCGACAACTCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG15050.15015209758988424No Hit
CGCATTCGACAACTCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG15040.15005232875427635No Hit
TCCATTCGATGTTGCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG15030.14995255991866846No Hit
GTCATTCGACGAGGCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG14800.14765787669968683No Hit
TGATTGGGATAAGCCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG14670.14636088183678417No Hit
TGATTGGGACAACTCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG14670.14636088183678417No Hit
TGCATTCGACGAGGCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG14420.14386666094658676No Hit
TCATTGGGATGTTGCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG14380.14346758560415518No Hit
CTATTGGGATGCACCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG14380.14346758560415518No Hit
ATCATTCGACGAGGCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG14210.14177151539882094No Hit
GACATTCGACTCAGCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG14180.14147220889199724No Hit
TTCATTCGACGAGGCCAGGGTTTTCCCAGTCACGACGGACAAGTTTCTCA14090.14057428937152616No Hit
TTATTGGGATGCACCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG14070.14037475170031039No Hit
AACATTCGATAAGCCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG14000.1396763698510551No Hit
GTCATTCGATAAGCCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG13970.13937706334423142No Hit
TAATTGGGACTCAGCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG13820.13788053081011298No Hit
TTATTGGGACGAGGCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG13780.1374814554676814No Hit
TTCATTCGATGTTGCCAGGGTTTTCCCAGTCACGACTCTCCACTCTGACG13730.1369826112896419No Hit
CTATTGGGATAAGCCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG13650.13618446060477873No Hit
ATCATTCGACTCAGCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG13600.13568561642673924No Hit
AGCATTCGATAAGCCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG13550.13518677224869977No Hit
CACATTCGAAGGAGCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG13490.13458815923505238No Hit
CCATTGGGAAGGAGCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG13480.1344883903994445No Hit
TGATTGGGATGTTGCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG13470.1343886215638366No Hit
ATATTGGGAAGGAGCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG13300.13269255135850236No Hit
CCCATTCGACAACTCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG13280.13249301368728655No Hit
TAATTGGGATGTTGCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG13090.1305974058107365No Hit
AACATTCGACTCAGCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG13010.12979925512587334No Hit
GTATTGGGACTCAGCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG12990.12959971745465756No Hit
CCCATTCGAAGGAGCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG12980.12949994861904965No Hit
GTCATTCGAGGAATCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG12960.12930041094783387No Hit
TCCATTCGACGAGGCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG12960.12930041094783387No Hit
ATATTGGGATGTTGCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG12900.12870179793418648No Hit
TGCATTCGATGCACCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG12840.1281031849205391No Hit
GTATTGGGATGTTGCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG12820.12790364724932332No Hit
TACATTCGATGCACCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG12820.12790364724932332No Hit
TCATTGGGAGGAATCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG12760.12730503423567593No Hit
ATCATTCGAAGGAGCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG12700.12670642122202858No Hit
TACATTCGACGAGGCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG12690.12660665238642066No Hit
ATATTGGGATGCACCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG12680.12650688355081277No Hit
CTCATTCGATAAGCCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG12670.12640711471520485No Hit
TACATTCGAGGAATCCAGGGTTTTCCCAGTCACGACATCGCTGAAGACAG12670.12640711471520485No Hit
GACATTCGAGGAATCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG12620.12590827053716538No Hit
GTATTGGGAGGAATCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG12610.1258085017015575No Hit
GGCATTCGAAGGAGCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG12600.12570873286594958No Hit
ATATTGGGACTCAGCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG12470.12441173800304695No Hit
CACATTCGATAAGCCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG12470.12441173800304695No Hit
TTCATTCGATGTTGCCAGGGTTTTCCCAGTCACGACTCTCCACTCTGAAG12390.12361358731818378No Hit
GCCATTCGAAGGAGCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG12330.1230149743045364No Hit
CTCATTCGATGCACCCAGGGTTTTCCCAGTCACGACGGACAAGTTTCTCA12220.12191751711284954No Hit
ATATTGGGATAAGCCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG12150.12121913526359424No Hit
AGCATTCGACTCAGCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG12110.12082005992116267No Hit
ACATTGGGAAGGAGCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG12090.12062052224994686No Hit
GGCATTCGATAAGCCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG12060.12032121574312318No Hit
TCATTGGGACTCAGCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG12020.11992214040069159No Hit
TGATTGGGAGGAATCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG11970.1194232962226521No Hit
TTATTGGGACAACTCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG11920.11892445204461265No Hit
CTATTGGGAGGAATCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG11900.11872491437339683No Hit
CAATTGGGAAGGAGCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG11870.11842560786657315No Hit
CTCATTCGACAACTCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG11750.1172283818392784No Hit
TCCATTCGATAAGCCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG11740.1171286130036705No Hit
CCCATTCGATGCACCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG11680.11652999999002313No Hit
TAATTGGGATAAGCCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG11670.11643023115441521No Hit
ACATTGGGATGCACCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG11630.11603115581198364No Hit
GACATTCGATAAGCCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG11600.11573184930515994No Hit
TTCATTCGACGAGGCCAGGGTTTTCCCAGTCACGACTCTCCACTCTGACG11600.11573184930515994No Hit
TTCATTCGAGGAATCCAGGGTTTTCCCAGTCACGACATCGCTGAAGACAG11540.11513323629151256No Hit
AACATTCGATGTTGCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG11530.11503346745590466No Hit
TTATTGGGATAAGCCCAGGGTTTTCCCAGTCACGACTCTCCACTCTGACG11530.11503346745590466No Hit
TCATTGGGAAGGAGCCAGGGTTTTCCCAGTCACGACTCTCCACTCTGACG11500.11473416094908098No Hit
TTATTGGGAAGGAGCCAGGGTTTTCCCAGTCACGACTCTCCACTCTGACG11500.11473416094908098No Hit
CACATTCGACTCAGCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG11450.1142353167710415No Hit
TAATTGGGAGGAATCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG11340.11313785957935464No Hit
GACATTCGAAGGAGCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG11310.11283855307253093No Hit
ATCATTCGATGCACCCAGGGTTTTCCCAGTCACGACGGACAAGTTTCTCA11310.11283855307253093No Hit
TGCATTCGAGGAATCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG11290.11263901540131516No Hit
TTCATTCGATGTTGCCAGGGTTTTCCCAGTCACGACATCGCTGAAGACAG11270.11243947773009937No Hit
CTATTGGGACGAGGCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG11260.11233970889449148No Hit
GGCATTCGACAACTCCAGGGTTTTCCCAGTCACGACTCTCCACTCTGACG11200.11174109588084409No Hit
GTATTGGGATAAGCCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG11150.1112422517028046No Hit
TACATTCGAGGAATCCAGGGTTTTCCCAGTCACGACTCTCCACTCTGACG11140.11114248286719669No Hit
TCATTGGGATAAGCCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG11140.11114248286719669No Hit
TGCATTCGACAACTCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG11140.11114248286719669No Hit
CACATTCGATGTTGCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG11090.11064363868915723No Hit
TCCATTCGACTCAGCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG11070.11044410101794143No Hit
CACATTCGATGCACCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG11030.11004502567550985No Hit
TCATTGGGAAGGAGCCAGGGTTTTCCCAGTCACGACATCGCTGAAGACAG10910.10884779964821509No Hit
TTATTGGGATAAGCCCAGGGTTTTCCCAGTCACGACTCTCCACTCTGAAG10890.10864826197699928No Hit
GACATTCGATGTTGCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG10800.10775034245652823No Hit
TTATTGGGAAGGAGCCAGGGTTTTCCCAGTCACGACATCGCTGAAGACAG10790.10765057362092034No Hit
GTATTGGGACAACTCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG10770.10745103594970452No Hit
CTCATTCGACTCAGCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG10730.10705196060727296No Hit
CGCATTCGATAAGCCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG10670.10645334759362558No Hit
AGCATTCGAAGGAGCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG10630.10605427225119399No Hit
TGATTGGGAAGGAGCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG10580.1055554280731545No Hit
AGCATTCGATGTTGCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG10560.10535589040193871No Hit
GTCATTCGATGCACCCAGGGTTTTCCCAGTCACGACGGACAAGTTTCTCA10530.10505658389511502No Hit
ACCATTCGATGCACCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG10510.10485704622389923No Hit
GCCATTCGATGCACCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG10490.10465750855268344No Hit
GGATTGGGACAACTCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG10430.10405889553903606No Hit
TCCATTCGAGGAATCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG10420.10395912670342815No Hit
CAATTGGGATGCACCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG10410.10385935786782026No Hit
TCCATTCGATGCACCCAGGGTTTTCCCAGTCACGACGGACAAGTTTCTCA10410.10385935786782026No Hit
CTATTGGGATGTTGCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG10400.10375958903221236No Hit
TTCATTCGAGGAATCCAGGGTTTTCCCAGTCACGACTCTCCACTCTGACG10390.10365982019660447No Hit
CGCATTCGACTCAGCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG10380.10356005136099658No Hit
TCATTGGGACAACTCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG10350.10326074485417287No Hit
GCCATTCGACTCAGCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG10310.1028616695117413No Hit
CGCATTCGATGCACCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG10290.1026621318405255No Hit
TAATTGGGATGCACCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG10280.10256236300491761No Hit
AACATTCGAGGAATCCAGGGTTTTCCCAGTCACGACATCGCTGAAGACAG10230.10206351882687811No Hit
GCCATTCGATGTTGCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG10220.10196374999127022No Hit
TTATTGGGAAGGAGCCAGGGTTTTCCCAGTCACGACTCTCCACTCTGAAG10220.10196374999127022No Hit
TTCATTCGACGAGGCCAGGGTTTTCCCAGTCACGACATCGCTGAAGACAG10140.10116559930640706No Hit
TCCATTCGACAACTCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG10120.10096606163519126No Hit
GGATTGGGAGGAATCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG10100.10076652396397547No Hit
GGATTGGGACTCAGCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG10070.10046721745715177No Hit
TCATTGGGAAGGAGCCAGGGTTTTCCCAGTCACGACTCTCCACTCTGAAG10060.10036744862154387No Hit
GCCATTCGATAAGCCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG10030.1000681421147202No Hit
CCATTGGGAGGAATCCAGGGTTTTCCCAGTCACGACCAGAAGACAGAAAG10030.1000681421147202No Hit

[FAIL]Adapter Content

Adapter graph