FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005002604

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005002604
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences411426051
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG2306300.015.7421159
GAGCGTC2602250.014.088278
ATCGGAA2957250.012.7404331
AGAGCGT3022700.012.2077597
TCGGAAG3084750.012.16350652
CGGAAGA3291150.011.3868663
AAGAGCG3557150.010.5692126
TCCGATC292200.07.1983213
GAAGAGC6181100.06.52098235
CGCCGTA1384000.05.46349755-59
TCGCCGT1438750.05.266673655-59
CCGATCT417950.05.08123354
Produced by FastQC (version 0.11.5)