FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005002617

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005002617
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences382076592
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA963850.042.496891
ATCGGAA1420450.029.1477051
TCGGAAG1546350.026.8023592
CGGAAGA1745000.023.7148084
TATGCCG1066350.015.41875145-49
CTCGTAT1036850.014.17660540-44
CGGCTAT1152350.014.13719430-34
CGTATGC1180600.013.90084545-49
TCTCGTA1071000.013.85317840-44
ATGCCGT1294600.012.71372145-49
GCCGTCT1294250.012.59617150-54
ACCGGCT1331050.012.4309230-34
ATCTCGT1264300.011.88767540-44
GTCACCG1452250.011.47496725-29
CGTCTGA1497300.011.12234115-19
CACCGGC1492600.011.10295830-34
ACACGTC1507100.011.07610510-14
AGAGCAC3975350.010.8748347
CGTCTTC1531100.010.87017150-54
CCGTCTT1558950.010.70574250-54
Produced by FastQC (version 0.11.5)