FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005002623

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005002623
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences423935738
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA1100450.044.697351
ATCGGAA1651250.031.9839741
TCGGAAG1788250.029.4680462
CGGAAGA2039950.025.868673
TATGCCG1274750.016.0109345-49
CTCGTAT1223150.015.22111440-44
CGGCTAT1348600.015.03212830-34
TCTCGTA1253050.014.86253740-44
CGTATGC1401750.014.52931145-49
ATGCCGT1489750.013.68565145-49
GCCGTCT1522550.013.29260350-54
ACCGGCT1548150.013.219974530-34
ATCTCGT1469100.012.82476540-44
AGAGCAC4455200.012.2925977
GTCACCG1686150.012.22330125-29
CGTCTGA1716050.011.98431115-19
ACACGTC1733800.011.89680810-14
CGTCTTC1762800.011.69816550-54
CACCGGC1758500.011.68640830-34
CCGTCTT1802950.011.408750-54
Produced by FastQC (version 0.11.5)