FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005002630

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005002630
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences361887135
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG1268900.013.8555039
GAGCGTC1532750.011.6031818
ATCGGAA1691000.010.7194881
TCCGATC260650.010.43172553
TCGGAAG1802500.010.0765942
AGAGCGT1863350.09.672987
CGGAAGA1992500.09.1994393
AAGAGCG2206150.08.3280496
CCGATCT374050.07.1333364
TTCCGAT447750.06.4936682
CGCCGTA702350.05.84756355-59
CTTCCGA559850.05.51715951
TCGCCGT764750.05.360944355-59
Produced by FastQC (version 0.11.5)