FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005002645

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005002645
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences429858234
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA1027800.034.5711751
ATCGGAA1319150.027.2190042
TCGGAAG1446600.024.7699833
CGGAAGA1649900.021.9097294
TATGCCG931250.011.15115245-49
CTCGTAT927400.010.3796940-44
TCTCGTA971050.010.00417740-44
CGTATGC1070800.09.73851645-49
ATGCCGT1170650.08.98465645-49
AGAGCAC4233350.08.9756558
GCCGTCT1206150.08.66980250-54
ATCTCGT1173450.08.49359440-44
GAAGAGC4693800.08.2078956
GAGCACA4708900.08.1507669
CGTCTTC1468150.07.40207950-54
CGTCTGA1443350.07.35128115-19
CCGTCTT1492600.07.268199450-54
ACACGTC1491450.07.12975310-14
TCGTATG1087250.06.65501845-49
TGCCGTC1164000.06.449166350-54
Produced by FastQC (version 0.11.5)