FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005002702

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005002702
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences387015157
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG2038500.015.424219
ATCGGAA2561050.013.776331
GAGCGTC2314700.013.6210748
TCGGAAG2715050.012.6968062
AGAGCGT2644300.012.0821387
CGGAAGA2922150.011.56938653
AAGAGCG3189400.010.5466536
GAAGAGC5690300.06.36356075
TCCGATC286900.05.5330923
CGCCGTA1237200.05.339311655-59
TCGCCGT1298850.05.06690855-59
Produced by FastQC (version 0.11.5)