FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005003379

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005003379
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1005176
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATAGCCA7101.5742115E-410.0421748
TTGACTG6550.0092239828.7083278
CTCAAAT8559.5604215E-48.3858351
GAGATTA7750.00387226428.2815825
AGAGATT11350.0020884376.91145234
AAAATGT17801.7067911E-46.0095753
Produced by FastQC (version 0.11.5)