FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005003384

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005003384
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences488898
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CATCAGT4350.00511277911.2896951
CCCCCCC1200.0052889049.31987290-94
GTTAACC1400.0093390188.69599115-119
TTCAATA9906.4836866E-58.4752112
Produced by FastQC (version 0.11.5)