FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005003387

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005003387
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1091076
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTACGC3500.002330991716.111052145
GTACAAT8300.00680758947.77793551
CGCCTGT9450.0025545877.59046031
TCCGATA12306.338932E-46.96018844
CACAAAT10500.0071280226.8314141
ATTTTCC29702.0882253E-65.28410246
CTTTCAT19100.00250125025.25768571
CTTTATT19200.00267033655.23030141
AAAATGC19700.00394297535.069525
Produced by FastQC (version 0.11.5)