FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005003388

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005003388
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1381871
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCCCAT7500.00255094248.6732281
CGAGATT8400.00708229057.7439541
TAATGTC9550.0026943577.5496419
CCGATTC13400.00148603876.45733453
GTCTGCT16700.0027125355.62634561
CTTTGAA24657.083342E-55.2778271
ATTTATC22506.175156E-45.12704476
CTTTCGG19800.00356932575.11048841
Produced by FastQC (version 0.11.5)