FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005003392

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005003392
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences705851
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCCCCC300.001705083223.62698410-14
GTAAATT6658.4877836E-510.6731562
CACAAGA4750.00888366210.4819981
GCAAACG6700.00109006519.5206483
ATATTCC14900.00589100925.7081296
Produced by FastQC (version 0.11.5)