FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005003393

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005003393
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences591883
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAACAGT4550.00520014411.2646511
CTTATAT6455.7010725E-410.2167771
TTGGAAT8004.850136E-48.9762223
CAACACC6550.00741114568.942931
AACTTTG6550.0086922318.770665
CTTCAAA9900.00328792657.3959831
Produced by FastQC (version 0.11.5)