FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005003405

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005003405
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences905952
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCACGG6650.0097230288.6522191
CTCAAAG7900.00426288.1935961
CAAAGAT14305.845118E-57.0412721
GCAACGC10350.006675516.87760548
CCGAAAA14450.00356325885.97272541
CTTTCAT15150.00602746245.6967581
Produced by FastQC (version 0.11.5)