FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005003407

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005003407
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1710953
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCTTGT13350.0095393265.97579151
CTAAAAT18602.475473E-45.848741
CTATTAT21352.7035113E-45.43508241
CTTTAAT27159.947144E-65.34249541
CCCGGAT19650.0031122325.16713141
CTTTTAT40052.9873263E-85.07036831
GTCAAAG20250.0045261515.0140311
Produced by FastQC (version 0.11.5)