FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005003416

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005003416
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1126375
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACCAAT10600.00712408036.8318491
CAACAAG15902.1363754E-46.3763921
GATTTGC12500.00510979966.3461555
CCGAAAT15250.00601155175.69843441
CAAAAAT24601.1174236E-55.5932291
Produced by FastQC (version 0.11.5)