FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005003423

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005003423
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences520384
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGGGAC1050.009735187526.325879
GAACTCC3953.0431082E-416.409117140-144
CTTGAAC3750.001856108412.9257591
GCATAGC4550.00797568810.6346676
CACCGAT6050.0061042989.1563821
CTCAAAA7805.4128875E-48.8775821
CAAAAAT13758.1561484E-78.0576161
CAAAAAA15953.951833E-46.07794331
Produced by FastQC (version 0.11.5)