FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005003425

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005003425
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1423717
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCAAAT9803.4445748E-58.9479061
CTAAGAA7650.00276341948.5970081
ACCGATC8100.00511593658.0298494
CCCATCC9550.00236177147.6517871
AATCACT11450.00199462786.94210776
CTATTCT10700.00715151946.8293981
CTCCGAT12150.0033093776.6158041
GTTCAAT14604.7310002E-46.5066391
CTTCAAG18351.8558704E-45.97339771
CTCCTGT14950.00436471085.86551671
TTCGTAT16350.00211432045.7455258
CGAAGAT16700.00271641535.62570243
CCGATAC15950.0089324055.49777271
CTTCAAA26806.93921E-65.45332571
CTTTAAA20106.377091E-45.45332571
CAACAAT18450.0077048325.14888531
Produced by FastQC (version 0.11.5)