FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005003431

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005003431
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1215053
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCCAAT5950.00374807819.7164261
CTCAAAT8901.3385773E-48.9317421
CACCGCT11250.00165412997.06600051
ATCTTGG10350.00590566876.9655496
GTTTGAA15001.02857746E-46.74481871
CTTCGAT12950.0072221656.13841721
GTTTATT14250.00289333756.08555031
CTTCAAA19354.436314E-45.60200831
CTTCCTT18150.00119761775.574231
CTGAAAT17100.00359549985.49389931
CACAAAA17200.00385184125.46195841
CTTTTCT27005.4479264E-55.08537861
CTTCCAT18650.0099412445.03730251
Produced by FastQC (version 0.11.5)