FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005003450

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005003450
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences582223
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTTAATT4402.892772E-413.1949631
CAAACGT3300.00877538513.19496251
ATCCACT4850.0092357210.4266766
CACCAGT4900.0096334910.3674711
AATCCAC6600.0088067688.7566025
TTAATTC7950.0043236588.1797412
CAAAAAT15900.0092836645.47715431
CAAAAAA18800.00176514095.40432021
Produced by FastQC (version 0.11.5)