FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005003452

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005003452
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1119701
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATTCGAA6906.023529E-712.5530715
CTCCCAA6550.0080399238.8558381
TTGAACC8250.0060971257.87427
CATCAAT18300.00766737435.1507831
TTTGATT19800.00355128395.1123232
Produced by FastQC (version 0.11.5)