FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005003465

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005003465
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1205940
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCGCCC8150.00707821977.74429231
CCCAGCT11302.9192018E-47.44731331
TCTTTAC15100.0079193496.7569976145
CTTCAAC12650.0077314756.09816271
CTTTTAT23751.6971244E-65.90558861
CTTTGTT15400.0095439955.46458671
Produced by FastQC (version 0.11.5)