FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005003478

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005003478
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1503052
Sequences flagged as poor quality0
Sequence length100-151
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACTACAC6951.1183034E-410.3884435
CTCCGAT11452.6238973E-58.2233361
CCTCGAT11550.00213363356.89796351
TCGATCT11800.00276262366.7307033
CTTCACA13000.0073460196.1285761
CTCAAAT13350.0096684485.9679011
CTTTACT16450.0022119345.7238421
CTTCTAA16750.00274192245.6213261
CAAAGAT22157.8016805E-55.5588561
CTTTGAC15800.0088775955.5009081
CTTTGCT20459.05516E-45.3126131
Produced by FastQC (version 0.11.5)