FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005003479

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005003479
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1821080
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGCTC9650.00286283347.50331161
ACAATTG12700.00594721646.25476363
CCCTTGT12800.00627579176.2224731
AACAATT26803.49155E-86.19900942
TAACAGG12900.00700661266.15677559
CACCAAT15850.00142493195.9387411
CGTAAAT14750.0041631065.89073561
CCCAAAG15150.0056035055.73520471
GTTTTAA20251.2977127E-45.72104361
GTTTAAA16750.00275269275.61964461
GAATAAC15550.0077114485.57187376
GTTCTGT18300.00129805695.539331
CAACAAT24851.330247E-55.5361461
GTTCAAC15850.009224625.4819151
CTTTTAT39855.0204108E-95.26926471
CAAACAT19300.00253680955.25231841
TCAGGCT17950.0064213585.22998953
CCACAAT18150.007085485.1861741
TTTTACC27156.0661165E-55.05282357
Produced by FastQC (version 0.11.5)