FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005003495

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005003495
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences54631149
Sequences flagged as poor quality0
Sequence length26
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGGACTG185600.017.6256751
ACTGAAC177250.017.4795781
GCGCGAT149650.017.4611341
ATCGAGT179650.017.25721
GACTAAC192000.017.1579931
GACTGCG227500.017.1322151
ACTGATG149850.017.130731
GGGAGAT183100.017.0577011
CCGGGAT148600.017.0459371
GATCGCG185750.017.0351661
TCCGCGG162050.017.0062338
GGGACCT132250.016.921791
CACCGAA142650.016.9006528
AGAAACC207100.016.8895368
TGACTAG171850.016.8238071
CTGATAG202500.016.8166891
CGCTATC206550.016.729121
GGATTAC185850.016.708411
TGCGGGT149300.016.6778891
TGGCTGG182200.016.6752511
Produced by FastQC (version 0.11.5)