FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005003510

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005003510
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences54403814
Sequences flagged as poor quality0
Sequence length26
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGGACTG183800.017.6952151
GCGCGAT147650.017.616691
ACTGAAC179500.017.210651
GACTGCG227650.017.2091481
ATCGAGT177750.017.1999861
GATCGCG194050.017.183281
GGGAGAT175500.017.141181
GACTAAC191150.017.0828461
GGATTAC187250.016.9524561
TGGCTGG189100.016.940031
AGAAACC202400.016.9148168
CCGGGAT146350.016.8845161
ACTGATG153250.016.8815541
TGACTAG164700.016.868121
TCCGCGG164100.016.8412198
CTGATAG199700.016.7422081
GGGACCT138100.016.7413561
TAACTGA120100.016.6904182
CACCGAA143700.016.6714768
CGCTATC214050.016.6480371
Produced by FastQC (version 0.11.5)