FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005003535

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005003535
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences47078943
Sequences flagged as poor quality0
Sequence length26
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAATGGA250900.018.6385888
GCGCGAT179800.018.5109831
ACGAGGA184150.018.3616371
TGACGGC167550.018.3537921
CTGCGGA171150.018.1956941
TGCTACC248150.018.1895181
CCGGTAG225400.018.1125281
GGGAATG151450.018.0987111
GGGAGAT148250.018.0710011
GCGGGTG91850.018.0680582
TGCGGGT159100.017.9767151
GGCGACT101500.017.7013631
CTGAAAC204950.017.6696111
ATCGAGT175300.017.6450941
TGACTAG166500.017.6283741
CCACCTA242500.017.5778661
GAAGCGA74650.017.5682956
GCTGCAG178900.017.496921
TCGCGAG166900.017.4782331
CCGGAAA112800.017.4711510
Produced by FastQC (version 0.11.5)